BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030E09LP1|AL429237
(920 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1781 1739 0.0
>3x_Contig1781
Length = 20717
Score = 1739 bits (874), Expect = 0.0
Identities = 911/923 (98%), Gaps = 3/923 (0%)
Strand = Plus / Minus
Query: 1 gatctttgaccatgggaatggcaggcgatgagttgtactctctgtagggcttttggcttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2809 gatctttgaccatgggaatggcaggcgatgagttgtactctctgtagggcttttggcttg 2750
Query: 61 gctatatgckttatatatgtgttatatagtcatcntagaataaactatgcatgacatcgt 120
||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 2749 gctatatgctttatatatgtgttatatagtcatcttagaataaactatgcatgacatcgt 2690
Query: 121 tgagtgctttcgattgcggttgggattgtctctgagaatctggagcagatgctcttgtcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2689 tgagtgctttcgattgcggttgggattgtctctgagaatctggagcagatgctcttgtcg 2630
Query: 181 aagcgactttcctctgtttgaaagtcctgcgaacttcttcatcgacctgctgtgattctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2629 aagcgactttcctctgtttgaaagtcctgcgaacttcttcatcgacctgctgtgattctt 2570
Query: 241 gttggttacgtttcttgctctgtttcatcttgttgaccatctttgatttctctacgttat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2569 gttggttacgtttcttgctctgtttcatcttgttgaccatctttgatttctctacgttat 2510
Query: 301 ggatgaactctgcgttcaacttgttggcctgtgagatttccaattgtagctttgcttgtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2509 ggatgaactctgcgttcaacttgttggcctgtgagatttccaattgtagctttgcttgtc 2450
Query: 361 tgatatcgttttctctagcgatttgttctgtcaaatcggcccatttgaacccgggcaagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2449 tgatatcgttttctctagcgatttgttctgtcaaatcggcccatttgaacccgggcaagt 2390
Query: 421 atttaacgttcatgacgtcgtcatggtagaaatwtcccttcwwaccaccgataatattac 480
||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 2389 atttaacgttcatgacgtcgtcatggtagaaatttcccttcttaccaccgataatattac 2330
Query: 481 cgtttagagtcgatgcgcacagtttagcgtccttctttctgataaactcggcccaacctt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2329 cgtttagagtcgatgcgcacagtttagcgtccttctttctgataaactcggcccaacctt 2270
Query: 541 cttcaaacatcgttttcttgttcccaccactcttgacacgctgctggtgcttgtgctcct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2269 cttcaaacatcgttttcttgttcccaccactcttgacacgctgctggtgcttgtgctcct 2210
Query: 601 cttcacgtttcaagaacagacggtccacttcaccgaatcttgtgagaatctgccttagct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2209 cttcacgtttcaagaacagacggtccacttcaccgaatcttgtgagaatctgccttagct 2150
Query: 661 tggctggtttcatgtacggtggaaccctcgataggtaaaccaca-ccggtcttgtgtttc 719
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 2149 tggctggtttcatgtacggtggaaccctcgataggtaaaccacacccggtcttgtgtttc 2090
Query: 720 gtcttcttatcgctcttcagctttttgagtcgtctctgcttttctttctctatctgctgt 779
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2089 gtcttcttatcgctcttaagctttttgagtcgtctctgcttttctttctctatctgctgt 2030
Query: 780 tctgtgagtagtactaccttatcctccggttcttcttcatcctgtacttcctcgtcctct 839
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2029 tctgtgagttgtactaccttatcctccggttcttcttcatcctgtacttcctcgtcctct 1970
Query: 840 tcctcttgctcttcctcgtcctcttcttgatcaaactgaatcacattcctcttcgcatcc 899
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1969 tcctcttgctcttcctcgtcctcttcttgatcaaactgaatcacattcttcttcgcatcc 1910
Query: 900 -tcccagtkatc-acacttggtt 920
||||||| ||| ||||||||||
Sbjct: 1909 ttcccagtgatcaacacttggtt 1887
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6407
Number of Sequences: 1807
Number of extensions: 6407
Number of successful extensions: 77
Number of sequences better than 1.0e-20: 1
length of query: 920
length of database: 10,358,551
effective HSP length: 16
effective length of query: 904
effective length of database: 10,329,639
effective search space: 9337993656
effective search space used: 9337993656
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)